Petrogale targeted loci project penicillata complex - SRA

SRX11237060: Petrogale targeted loci project penicillata complex
1 ILLUMINA (Illumina HiSeq 2500) run: 4.1M spots, 821.2M bases, 370.4Mb downloads

Design: Target enrichment using SeqCap EZ Developer Library. Library preparation following Myer M, Kircher M. 2010. Cold Spring Harb. Protoc. 2010, doi:10.1101/pdb.prot5448. For more details, see:Potter S, Bragg JG, Peter BM, Bi K, Moritz C Data from:Phylogenomics at the tips: inferring lineages and their demographic history in a tropical lizard, Carlia amax. Molecular Ecology

Submitted by: Australian National University

Study: Exon capture loci and reduced representation data from Queensland rock-wallabies (genus Petrogale)

PRJNA741610 • SRP325748 • All experiments • All runs

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This study looked at the divergence history and introgression between five species of rock-wallaby from northeast Australia which form part of the penicillata species complex. They have chromosomal rearrangements which range from simple to complex and this data (exon and DArT SNP) was used to test the role of these rearrangements in speciation.

Sample: S724

SAMN19884274 • SRS9282854 • All experiments • All runs

Organism: Petrogale assimilis

Library:

Name: SP19_indexing31

Instrument: Illumina HiSeq 2500

Strategy: Targeted-Capture

Source: GENOMIC

Selection: unspecified

Layout: PAIRED

Runs: 1 run, 4.1M spots, 821.2M bases, 370.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR14923659	4,065,298	821.2M	370.4Mb	2022-07-31

ID:: 15005285

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